550221 Advanced Bioinformatics Laboratory Course I: Sequence Analysis

Course offering details

Instructors: Prof. Dr. Frank Oliver Glöckner; Prof. Dr. Marc-Thorsten Hütt

Type: Lab

Org-unit:

Course Name Abbreviation: AdvBICBLab I

Credits: 7.50

Min. | Max. participants: - | -

Partial Grades:
Final Grade

Official Course Description:
The increasing amount of biological data in particular of protein and DNA sequences requires students to gain practical experience with algorithms and computational tools for sequence analysis. The lab course intends to train students in the application of computational approaches to nucleic acid and protein sequence analysis and secondary structure prediction. The script language Perl will be introduced and students will be trained to write own applications and to program bioinformatics algorithms and methods. It will give a practical introduction and an overview on available and frequently applied sequence analysis methods including the software to align and compare sequences and to predict coding and non-coding regions. In addition, computational methods for the prediction of protein and RNA secondary structure will be introduced and applied to selected examples. The generation of a SQL data base in combination with a script language will be introduced.

Literature
Primary Text
Required Reading (To view a list click a category.)
Recommended Reading (To view a list click a category.)
Appointments
Date From To Room Instructors
1 Mon, 5. Sep. 2011 14:15 18:30 CLAMV Teaching Lab I, Large Teaching Lab Prof. Dr. Frank Oliver Glöckner; Prof. Dr. Marc-Thorsten Hütt
2 Tue, 6. Sep. 2011 14:15 18:30 CLAMV Teaching Lab I, Large Teaching Lab Prof. Dr. Frank Oliver Glöckner; Prof. Dr. Marc-Thorsten Hütt
3 Mon, 12. Sep. 2011 14:15 18:30 CLAMV Teaching Lab I, Large Teaching Lab Prof. Dr. Frank Oliver Glöckner; Prof. Dr. Marc-Thorsten Hütt
4 Tue, 13. Sep. 2011 14:15 18:30 CLAMV Teaching Lab I, Large Teaching Lab Prof. Dr. Frank Oliver Glöckner; Prof. Dr. Marc-Thorsten Hütt
5 Mon, 19. Sep. 2011 14:15 18:30 CLAMV Teaching Lab I, Large Teaching Lab Prof. Dr. Frank Oliver Glöckner; Prof. Dr. Marc-Thorsten Hütt
6 Tue, 20. Sep. 2011 14:15 18:30 CLAMV Teaching Lab I, Large Teaching Lab Prof. Dr. Frank Oliver Glöckner; Prof. Dr. Marc-Thorsten Hütt
7 Mon, 26. Sep. 2011 14:15 18:30 CLAMV Teaching Lab I, Large Teaching Lab Prof. Dr. Frank Oliver Glöckner; Prof. Dr. Marc-Thorsten Hütt
8 Tue, 27. Sep. 2011 14:15 18:30 CLAMV Teaching Lab I, Large Teaching Lab Prof. Dr. Frank Oliver Glöckner; Prof. Dr. Marc-Thorsten Hütt
9 Tue, 4. Oct. 2011 14:15 18:30 CLAMV Teaching Lab I, Large Teaching Lab Prof. Dr. Frank Oliver Glöckner; Prof. Dr. Marc-Thorsten Hütt
10 Mon, 10. Oct. 2011 14:15 18:30 CLAMV Teaching Lab I, Large Teaching Lab Prof. Dr. Frank Oliver Glöckner; Prof. Dr. Marc-Thorsten Hütt
11 Tue, 11. Oct. 2011 14:15 18:30 CLAMV Teaching Lab I, Large Teaching Lab Prof. Dr. Frank Oliver Glöckner; Prof. Dr. Marc-Thorsten Hütt
12 Mon, 24. Oct. 2011 14:15 18:30 CLAMV Teaching Lab I, Large Teaching Lab Prof. Dr. Frank Oliver Glöckner; Prof. Dr. Marc-Thorsten Hütt
13 Tue, 25. Oct. 2011 14:15 18:30 CLAMV Teaching Lab I, Large Teaching Lab Prof. Dr. Frank Oliver Glöckner; Prof. Dr. Marc-Thorsten Hütt
14 Mon, 31. Oct. 2011 14:15 18:30 CLAMV Teaching Lab II, Room 5 Prof. Dr. Frank Oliver Glöckner; Prof. Dr. Marc-Thorsten Hütt
15 Tue, 1. Nov. 2011 14:15 18:30 CLAMV Teaching Lab II, Room 5 Prof. Dr. Frank Oliver Glöckner; Prof. Dr. Marc-Thorsten Hütt
16 Mon, 7. Nov. 2011 14:15 18:30 CLAMV Teaching Lab II, Room 5 Prof. Dr. Frank Oliver Glöckner; Prof. Dr. Marc-Thorsten Hütt
17 Tue, 8. Nov. 2011 14:15 18:30 CLAMV Teaching Lab II, Room 5 Prof. Dr. Frank Oliver Glöckner; Prof. Dr. Marc-Thorsten Hütt
18 Mon, 14. Nov. 2011 14:15 18:30 CLAMV Teaching Lab II, Room 5 Prof. Dr. Frank Oliver Glöckner; Prof. Dr. Marc-Thorsten Hütt
19 Tue, 15. Nov. 2011 14:15 18:30 CLAMV Teaching Lab II, Room 5 Prof. Dr. Frank Oliver Glöckner; Prof. Dr. Marc-Thorsten Hütt
20 Mon, 21. Nov. 2011 14:15 18:30 CLAMV Teaching Lab II, Room 5 Prof. Dr. Frank Oliver Glöckner; Prof. Dr. Marc-Thorsten Hütt
21 Tue, 22. Nov. 2011 14:15 18:30 CLAMV Teaching Lab II, Room 5 Prof. Dr. Frank Oliver Glöckner; Prof. Dr. Marc-Thorsten Hütt
22 Mon, 28. Nov. 2011 14:15 18:30 Prof. Dr. Frank Oliver Glöckner; Prof. Dr. Marc-Thorsten Hütt
23 Tue, 29. Nov. 2011 14:15 18:30 CLAMV Teaching Lab II, Room 5 Prof. Dr. Frank Oliver Glöckner; Prof. Dr. Marc-Thorsten Hütt
24 Mon, 5. Dec. 2011 14:15 18:30 CLAMV Teaching Lab II, Room 5 Prof. Dr. Frank Oliver Glöckner; Prof. Dr. Marc-Thorsten Hütt
25 Tue, 6. Dec. 2011 14:15 18:30 CLAMV Teaching Lab II, Room 5 Prof. Dr. Frank Oliver Glöckner; Prof. Dr. Marc-Thorsten Hütt
Course specific exams
Description Date Instructors Mandatory
1. Final Grade No Date No
Contained in course catalogues
Course catalogue
Course Catalogue > School of Engineering and Science > Undergraduate Programs > Applied and Computational Mathematics
Class Session Overview
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Instructors
Prof. Dr. Frank Oliver Glöckner
Prof. Dr. Marc-Thorsten Hütt